I normally go daily to the Breeding Generator to check which of my females are ready for breeding. Lately When I go under the All Species option it show my Nephinis, Lighira, and Ryori females that are supposedly able to breed. But when I go under these 3 species to breed them and not have to mess around with looking for my males they aren't under the list and when I check their pages they have gotten to the point 3 days has past and are still recovering.

I was also breeding my Ryori yesterday when I noticed it there as well that I had a female appear on the list that is still recovering from her last breeding. I know it's not a huge issue but it get's my hopes up thinking I can breed them from the All list and not from the Species list. (And it does Error if I try to breed)

It's because you're searching for "all species". The search doesn't then distinguish between fabled recovery times and regular recovery times - so it defaults to the regular.

Until I recode the generate pages, in order to avoid this you will just have to search by species.

okay thanks for the quick response ^^